STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DESI1Desumoylating isopeptidase 1. (230 aa)    
Predicted Functional Partners:
UBQLN4
Ubiquilin-4.
    
 
 0.919
PSMD12
26S proteasome non-ATPase regulatory subunit 12.
   
   0.907
TMBIM6
Bax inhibitor 1; Belongs to the BI1 family.
    
   0.905
PSMA6
Proteasome subunit alpha type.
    
   0.905
PSMB5
Proteasome subunit beta type-5.
    
   0.905
PSMC5
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
   
   0.905
PSMC4
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
   0.905
PSMD8
26S proteasome non-ATPase regulatory subunit 8.
    
   0.905
PSMD11
26S proteasome non-ATPase regulatory subunit 11.
    
   0.905
PSMA5
Proteasome subunit alpha type.
    
   0.905
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.