STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1939S ribosomal protein L19, mitochondrial. (273 aa)    
Predicted Functional Partners:
RPL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.999
RPL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.999
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 
 0.999
TUFM
Elongation factor Tu, mitochondrial.
   
 0.999
MRPL21
39S ribosomal protein L21, mitochondrial.
  
 
 0.999
RPL35
60S ribosomal protein L35.
   
 
 0.999
MRPL20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.999
MRPL9
39S ribosomal protein L9, mitochondrial.
   
 
 0.999
RPS11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.999
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.