Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOB2Protein Tob2. (340 aa)    
Predicted Functional Partners:
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.856
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.856
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 0.825
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.825
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 0.814
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.795
TNKS1BP1
Tankyrase-1-binding protein.
    
  0.745
RAVER2
Ribonucleoprotein PTB-binding 2.
    
   0.716
RIBC2
RIB43A-like with coiled-coils protein 2.
    
   0.585
CNOT4
CCR4-NOT transcription complex subunit 4.
     
 0.575
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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