NTNG2 protein (Lonchura striata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NTNG2

Netrin-G2. (500 aa)

Predicted Functional Partners:

LRRC4

0.955

IGDCC3

0.751

IGDCC4

0.751

NEO1

0.751

FNDC1

0.707

LRRC4B

0.570

LRRC4C

0.570

VASN

0.570

NPSR1

0.539

DRAXIN

0.512

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DRAXIN	FNDC1	ENSLSDP00000012263	ENSLSDP00000021447	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	Fibronectin type III domain-containing protein 1.	0.516
DRAXIN	IGDCC3	ENSLSDP00000012263	ENSLSDP00000016040	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	Immunoglobulin superfamily DCC subclass member 3.	0.616
DRAXIN	IGDCC4	ENSLSDP00000012263	ENSLSDP00000016048	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	Immunoglobulin superfamily DCC subclass member 4 isoform X1.	0.699
DRAXIN	NEO1	ENSLSDP00000012263	ENSLSDP00000016689	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	Neogenin.	0.865
DRAXIN	NTNG2	ENSLSDP00000012263	ENSLSDP00000003197	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	Netrin-G2.	0.512
FNDC1	DRAXIN	ENSLSDP00000021447	ENSLSDP00000012263	Fibronectin type III domain-containing protein 1.	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	0.516
FNDC1	NTNG2	ENSLSDP00000021447	ENSLSDP00000003197	Fibronectin type III domain-containing protein 1.	Netrin-G2.	0.707
IGDCC3	DRAXIN	ENSLSDP00000016040	ENSLSDP00000012263	Immunoglobulin superfamily DCC subclass member 3.	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	0.616
IGDCC3	NTNG2	ENSLSDP00000016040	ENSLSDP00000003197	Immunoglobulin superfamily DCC subclass member 3.	Netrin-G2.	0.751
IGDCC4	DRAXIN	ENSLSDP00000016048	ENSLSDP00000012263	Immunoglobulin superfamily DCC subclass member 4 isoform X1.	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	0.699
IGDCC4	NTNG2	ENSLSDP00000016048	ENSLSDP00000003197	Immunoglobulin superfamily DCC subclass member 4 isoform X1.	Netrin-G2.	0.751
LRRC4	NTNG2	ENSLSDP00000004701	ENSLSDP00000003197	Leucine-rich repeat-containing protein 4.	Netrin-G2.	0.955
LRRC4B	NTNG2	ENSLSDP00000001459	ENSLSDP00000003197	Leucine rich repeat containing 4B.	Netrin-G2.	0.570
LRRC4C	NTNG2	ENSLSDP00000013449	ENSLSDP00000003197	Leucine-rich repeat-containing protein 4C.	Netrin-G2.	0.570
NEO1	DRAXIN	ENSLSDP00000016689	ENSLSDP00000012263	Neogenin.	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	0.865
NEO1	NTNG2	ENSLSDP00000016689	ENSLSDP00000003197	Neogenin.	Netrin-G2.	0.751
NPSR1	NTNG2	ENSLSDP00000004020	ENSLSDP00000003197	Neuropeptide S receptor; Belongs to the G-protein coupled receptor 1 family.	Netrin-G2.	0.539
NTNG2	DRAXIN	ENSLSDP00000003197	ENSLSDP00000012263	Netrin-G2.	Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.	0.512
NTNG2	FNDC1	ENSLSDP00000003197	ENSLSDP00000021447	Netrin-G2.	Fibronectin type III domain-containing protein 1.	0.707
NTNG2	IGDCC3	ENSLSDP00000003197	ENSLSDP00000016040	Netrin-G2.	Immunoglobulin superfamily DCC subclass member 3.	0.751