TTF1 protein (Lonchura striata) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

TTF1

Transcription termination factor 1. (688 aa)

Predicted Functional Partners:

TAF1D

0.707

TWISTNB

0.681

POLR1E

0.669

POLR1C

0.654

CAVIN1

0.653

UBTF

0.650

POLR1B

0.646

POLR2E

0.613

MNAT1

0.601

TAF1C

0.599

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAVIN1	TTF1	ENSLSDP00000009015	ENSLSDP00000003218	Polymerase I and transcript release factor.	Transcription termination factor 1.	0.653
MNAT1	POLR1B	ENSLSDP00000018245	ENSLSDP00000022581	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.856
MNAT1	POLR1C	ENSLSDP00000018245	ENSLSDP00000005911	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.899
MNAT1	POLR2E	ENSLSDP00000018245	ENSLSDP00000020942	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.972
MNAT1	TAF1C	ENSLSDP00000018245	ENSLSDP00000019015	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	TATA box-binding protein-associated factor, RNA polymerase I, subunit C.	0.659
MNAT1	TTF1	ENSLSDP00000018245	ENSLSDP00000003218	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	Transcription termination factor 1.	0.601
MNAT1	UBTF	ENSLSDP00000018245	ENSLSDP00000007256	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	Nucleolar transcription factor 1.	0.662
POLR1B	MNAT1	ENSLSDP00000022581	ENSLSDP00000018245	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.856
POLR1B	POLR1C	ENSLSDP00000022581	ENSLSDP00000005911	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.999
POLR1B	POLR1E	ENSLSDP00000022581	ENSLSDP00000012790	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase I subunit RPA49.	0.999
POLR1B	POLR2E	ENSLSDP00000022581	ENSLSDP00000020942	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.999
POLR1B	TAF1C	ENSLSDP00000022581	ENSLSDP00000019015	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA box-binding protein-associated factor, RNA polymerase I, subunit C.	0.643
POLR1B	TAF1D	ENSLSDP00000022581	ENSLSDP00000000104	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA box-binding protein-associated factor RNA polymerase I subunit D.	0.614
POLR1B	TTF1	ENSLSDP00000022581	ENSLSDP00000003218	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription termination factor 1.	0.646
POLR1B	TWISTNB	ENSLSDP00000022581	ENSLSDP00000002835	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase I subunit RPA43.	0.999
POLR1B	UBTF	ENSLSDP00000022581	ENSLSDP00000007256	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nucleolar transcription factor 1.	0.744
POLR1C	MNAT1	ENSLSDP00000005911	ENSLSDP00000018245	DNA-directed RNA polymerases I and III subunit RPAC1.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.899
POLR1C	POLR1B	ENSLSDP00000005911	ENSLSDP00000022581	DNA-directed RNA polymerases I and III subunit RPAC1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR1C	POLR1E	ENSLSDP00000005911	ENSLSDP00000012790	DNA-directed RNA polymerases I and III subunit RPAC1.	DNA-directed RNA polymerase I subunit RPA49.	0.999
POLR1C	POLR2E	ENSLSDP00000005911	ENSLSDP00000020942	DNA-directed RNA polymerases I and III subunit RPAC1.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.999