Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110479912Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (342 aa)    
Predicted Functional Partners:
GBE1
1,4-alpha-glucan-branching enzyme.
  
 
 0.964
PYGL
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.951
PYGB
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.951
AGL
Glycogen debranching enzyme.
   
 0.937
LOC110475464
Lysosomal alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.921
SI
Maltase-glucoamylase, intestinal.
  
 
 0.921
GAA
Lysosomal alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.921
GANC
Neutral alpha-glucosidase C; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.921
PUDP
Pseudouridine-5'-phosphatase.
  
 
 0.588
PGGHG
Acid trehalase-like protein 1.
  
 
 0.574
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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