STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP77Uncharacterized protein C9orf171. (275 aa)    
Predicted Functional Partners:
SPACA9
Uncharacterized protein C9orf9.
   
 
 0.626
LOC110472786
Coiled-coil domain-containing protein 173.
    
 
 0.596
CUNH5orf49
Uncharacterized protein C5orf49.
   
   0.562
CUNH9orf116
UPF0691 protein C9orf116.
   
   0.556
EFHC2
EF-hand domain-containing family member C2.
   
   0.548
ENKUR
Enkurin.
   
   0.543
PACRG
Parkin coregulated gene protein.
   
   0.541
TEKT1
Tektin-1.
   
   0.540
TEKT2
Tektin-2.
   
   0.540
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
   0.530
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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