STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2AUBX domain-containing protein 2A. (335 aa)    
Predicted Functional Partners:
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.995
NSFL1C
NSFL1 cofactor p47.
    
 
0.990
UBXN6
UBX domain-containing protein 6.
    
 0.975
UBXN10
UBX domain protein 10.
    
 
 0.958
UBXN7
UBX domain-containing protein 7.
    
 
 0.948
ASPSCR1
Tether containing UBX domain for GLUT4.
    
 
 0.937
UBXN4
UBX domain-containing protein 4.
    
 0.935
SVIP
Small VCP/p97-interacting protein.
     
 0.922
LACTB
Serine beta-lactamase-like protein LACTB, mitochondrial.
    
  0.907
VCPIP1
Deubiquitinating protein VCIP135.
    
 
 0.906
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.