STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A21Mitochondrial 2-oxodicarboxylate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (272 aa)    
Predicted Functional Partners:
MIPOL1
Mirror-image polydactyly gene 1.
   
  
 0.607
KLHL18
Kelch-like protein 18.
      
 0.547
NEURL1
E3 ubiquitin-protein ligase NEURL1.
      
 0.544
NEURL1B
E3 ubiquitin-protein ligase NEURL1B.
      
 0.544
TBX20
T-box transcription factor TBX20.
    
   0.534
ZCCHC14
Zinc finger CCHC domain-containing protein 14.
    
 
 0.521
UNC79
Protein unc-79.
      
 0.476
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.