STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSC1Hamartin. (1154 aa)    
Predicted Functional Partners:
TSC2
Tuberin.
   
 0.999
LOC110473721
TBC1 domain family member 7.
    
 0.999
RHEB
GTP-binding protein Rheb.
   
 0.986
AKT3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.981
AKT1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.981
PRKAA1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.961
PRKAA2
Non-specific serine/threonine protein kinase.
    
 0.961
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta.
   
 0.952
GSK3B
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.934
DDIT4
DNA damage-inducible transcript 4 protein.
   
 
 0.931
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.