STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSTR1Somatostatin receptor type 1; Belongs to the G-protein coupled receptor 1 family. (400 aa)    
Predicted Functional Partners:
SST
Somatostatin.
   
 0.981
CORT
Somatostatin-2.
     
 0.936
UTS2B
Urotensin-2B.
     
 0.823
SMURF1
E3 ubiquitin-protein ligase.
    
 
 0.789
CBL
E3 ubiquitin-protein ligase CBL.
      
 0.783
CCK
Cholecystokinin.
   
 0.749
GRINA
Protein lifeguard 1.
      
 0.529
NPW
LOW QUALITY PROTEIN: neuropeptide W.
     
 0.521
ENSLSDP00000025165
annotation not available
    
 0.492
GAL
Galanin peptide.
    
 0.490
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.