Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SSTR1Somatostatin receptor type 1; Belongs to the G-protein coupled receptor 1 family. (400 aa)    
Predicted Functional Partners:
SST
Somatostatin.
   
 0.986
CORT
Somatostatin-2.
    
 0.944
UTS2B
Urotensin-2B.
     
 0.902
SMURF1
E3 ubiquitin-protein ligase.
    
 
 0.817
CBL
E3 ubiquitin-protein ligase CBL.
      
 0.808
GNB1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
  0.770
GNB3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
    
  0.768
GNAO1
Guanine nucleotide-binding protein G(O) subunit alpha.
    
  0.762
GNAI3
Guanine nucleotide-binding protein G(K) subunit alpha.
    
  0.762
GNAI2
Guanine nucleotide-binding protein G(I) subunit alpha-2.
    
  0.762
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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