STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)    
Predicted Functional Partners:
SEC13
Protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.996
SEC31B
Protein transport protein Sec31B.
   
 0.991
SEC31A
Protein transport protein Sec31A.
   
 0.991
SEC24A
Protein transport protein Sec24A.
   
0.955
SEC24C
Protein transport protein Sec24C.
   
0.948
SEC24B
Protein transport protein Sec24B.
   
0.945
SEC24D
Protein transport protein Sec24D.
   
0.942
SAR1A
GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.928
SEC22B
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.907
SAR1B
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.892
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.