Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TRPM1Transient receptor potential cation channel subfamily M member 3. (1654 aa)    
Predicted Functional Partners:
NUDT9
ADP-ribose pyrophosphatase, mitochondrial.
 
   
 0.670
TRPV2
Transient receptor potential cation channel subfamily V member 2; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.616
TRPA1
Transient receptor potential cation channel subfamily A member 1.
     
 0.607
TRPC4AP
Short transient receptor potential channel 4-associated protein.
     
 0.587
ELFN1
Protein ELFN1.
      
 0.579
LRIT3
Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family.
      
 0.577
NYX
Nyctalopin.
      
 0.567
NYX_1
Nyctalopin.
      
 0.566
CEMIP2
Transmembrane protein 2.
      
 0.522
CNPY3
Protein canopy 3.
      
 0.519
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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