STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN1-2Spectrin beta chain, non-erythrocytic 1. (2193 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha chain, non-erythrocytic 1.
   
0.867
ITSN2
Intersectin-2.
     
 0.672
ITSN1
Intersectin-1.
     
 0.518
ANK1-2
Ankyrin-1 isoform X1.
   
 0.507
ANK1
Ankyrin-1.
   
 0.507
ANK2
Ankyrin-2.
   
 0.507
ENSLSDP00000016830
annotation not available
   
 0.507
ANK3
Ankyrin-3.
   
 0.507
ENSLSDP00000025664
annotation not available
   
 0.497
TNKS
Poly [ADP-ribose] polymerase.
   
 0.443
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.