Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDPD4Glycerophosphodiester phosphodiesterase domain-containing protein 5. (517 aa)    
Predicted Functional Partners:
LOC110478814
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.566
LOC110482782
Glycerol-3-phosphate dehydrogenase, mitochondrial.
  
 0.566
L2HGDH
L-2-hydroxyglutarate dehydrogenase, mitochondrial.
    
 0.509
P2RY2
P2Y purinoceptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.475
TSKU
Tsukushin.
      
 0.466
LOC110480024
CDP-diacylglycerol--inositol 3-phosphatidyltransferase-like.
   
 
 0.450
NADK
NAD kinase.
   
 
  0.440
RAB30
Ras-related protein Rab-30.
      
 0.433
ISYNA1
Inositol-3-phosphate synthase 1-A.
     
  0.432
ARHGEF17
Rho guanine nucleotide exchange factor 17.
      
 0.430
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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