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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000003383Tumor necrosis factor superfamily, member 2. (230 aa)    
Predicted Functional Partners:
LOC110480833
Tumor necrosis factor receptor superfamily member 1A.
    
 0.969
JUN
Transcription factor AP-1.
   
 0.912
NFKB1
Nuclear factor NF-kappa-B p105 subunit.
   
 
 0.906
LOC110479725
Uncharacterized protein.
     
 0.900
CD40
Tumor necrosis factor receptor superfamily member 5.
   
 0.816
TNFRSF11B
Tumor necrosis factor receptor superfamily member 11B.
   
 0.816
PLEKHG5
Pleckstrin y domain-containing family G member 5.
    
 0.666
TNFRSF25
Tumor necrosis factor receptor superfamily member 25.
    
 0.666
PLEKHG7
Pleckstrin y domain-containing family G member 7.
    
 0.666
IL1B
Interleukin-1; Belongs to the IL-1 family.
   
  
 0.664
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.