Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SURF1SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (282 aa)    
Predicted Functional Partners:
LOC110473688
Cytochrome c oxidase assembly protein COX15.
  
 0.967
COA3
Cytochrome c oxidase assembly factor 3, mitochondrial.
   
 0.940
LOC110478540
Cytochrome c oxidase assembly protein COX14 homolog.
   
 0.940
SMIM20
Small integral membrane protein 20.
   
 
 0.939
CMC1
COX assembly mitochondrial protein.
   
 
 0.923
MT-CO2
Mitochondrially encoded cytochrome c oxidase II.
  
 0.891
COX10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 
 0.888
MT-CO1
Mitochondrially encoded cytochrome c oxidase I.
  
 0.885
SURF2
Surfeit locus protein 2.
      
 0.872
COX11
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 0.864
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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