Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000003426ELAV like protein 2/3/4. (114 aa)    
Predicted Functional Partners:
RBM38
RNA-binding protein 38.
  
   
 0.609
RBM24
RNA-binding protein 24.
  
   
 0.594
RBFOX2
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 
 0.576
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1.
  
 0.569
RBMX
RNA-binding motif protein, X chromosome isoform X1.
  
 0.568
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
  
 0.562
RBFOX1
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 
 0.559
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
  
 0.543
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
  
 0.537
ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
  
 
 0.527
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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