STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRTFAMKL/myocardin-like protein 1. (1112 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.961
PHACTR1
Phosphatase and actin regulator.
   
  
 0.578
NBR1
Next to BRCA1 gene 1 protein.
    
 0.483
KPNA7
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.475
KPNA2
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.475
MIB2
E3 ubiquitin-protein ligase MIB2.
   
 0.467
LOC110474922
Dual specificity mitogen-activated protein kinase kinase 4 isoform X1.
   
 0.458
LOC110477020
Dual specificity mitogen-activated protein kinase kinase 4.
   
 0.458
MAP2K5
Dual specificity mitogen-activated protein kinase kinase 5.
   
 0.453
MAP2K2
Dual specificity mitogen-activated protein kinase kinase 2; Belongs to the protein kinase superfamily.
   
 0.453
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.