Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRTFAMKL/myocardin-like protein 1. (1112 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.989
PHACTR1
Phosphatase and actin regulator.
   
  
 0.692
ACTG1
Actin, cytoplasmic 2.
    
 0.606
ACTB
Actin, cytoplasmic 1.
    
 0.606
LOC110479753
Actin, cytoplasmic type 5.
    
 0.606
ACTG2
Actin gamma 2, smooth muscle.
    
 0.599
ACTA2
Actin, aortic smooth muscle.
    
 0.599
ACTC1
Actin, alpha cardiac muscle 1.
    
 0.588
ACTA1
Actin, alpha skeletal muscle.
    
 0.588
ACTL10_1
Actin-like protein 10; Belongs to the actin family.
    
 0.586
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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