Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110481825Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1908 aa)    
Predicted Functional Partners:
MYL3
Myosin light chain 1, cardiac muscle.
   
 0.957
MYL4
Myosin light chain, embryonic.
   
 0.957
ACTC1
Actin, alpha cardiac muscle 1.
   
 0.927
LOC110478077
Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
 
0.900
LOC110479532
Myosin-7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
 
0.900
MYH7
Myosin heavy chain 6/7.
  
  
 
0.900
MYL1
Myosin light chain 1, skeletal muscle isoform.
   
 0.885
LOC110481534
Myosin light polypeptide 6.
   
 0.820
TNNC2
Troponin C, skeletal muscle.
   
 0.782
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.732
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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