STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110481825Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1908 aa)    
Predicted Functional Partners:
MYL3
Myosin light chain 1, cardiac muscle.
   
 0.947
MYL4
Myosin light chain, embryonic.
   
 0.947
ACTC1
Actin, alpha cardiac muscle 1.
   
 0.933
LOC110478077
Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
 
0.900
LOC110479532
Myosin-7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
 
0.900
MYH7
Myosin heavy chain 6/7.
  
  
 
0.900
MYL1
Myosin light chain 1, skeletal muscle isoform.
   
 0.771
LOC110481534
Myosin light polypeptide 6.
   
 0.670
ARHGAP39
Rho GTPase-activating protein 39.
    
 0.586
ARHGAP15
Rho GTPase-activating protein 15.
   
 
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.