STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110483420Keratin. (101 aa)    
Predicted Functional Partners:
IL7
Interleukin-7.
  
     0.542
CD80
T-lymphocyte activation antigen CD80.
  
     0.517
ENSLSDP00000022300
annotation not available
  
     0.505
ENSLSDP00000023677
annotation not available
  
     0.504
IL21R
Interleukin-21 receptor.
  
     0.485
LY96
Lymphocyte antigen 96.
  
     0.483
LOC110480729
Apovitellenin-1.
  
     0.472
RLOC_00014018
Uncharacterized protein.
  
     0.467
SYNM
Synemin; Belongs to the intermediate filament family.
  
     0.441
TNFRSF8
Tumor necrosis factor receptor superfamily member 1B.
  
     0.425
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.