STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMADHCMethylmalonic aciduria and homocystinuria type D, mitochondrial. (320 aa)    
Predicted Functional Partners:
MMACHC
Methylmalonic aciduria and homocystinuria type C.
    
 0.866
MTR
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.863
MTRR
Methionine synthase reductase.
     
 0.862
LOC110477491
Putative oxidoreductase ZK1290.5.
    
 0.790
LOC110470994
Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism.
    
 0.720
MMUT
Methylmalonyl-CoA mutase, mitochondrial.
   
  
 0.665
LMBRD1
Putative lysosomal cobalamin transporter.
      
 0.659
MMAA
Methylmalonic aciduria type A protein, mitochondrial.
      
 0.655
MMAB
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.655
ORC4
Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
      
 0.553
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.