RBM43 protein (Lonchura striata) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

RBM43

RNA-binding protein 43. (337 aa)

Predicted Functional Partners:

RNF144B

0.547

IQSEC3

0.539

KPNB1

0.476

STN1

0.444

SASS6

0.444

B2M

0.444

RPA2

0.444

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B2M	RBM43	ENSLSDP00000015644	ENSLSDP00000003486	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	RNA-binding protein 43.	0.444
IQSEC3	RBM43	ENSLSDP00000025424	ENSLSDP00000003486	IQ motif and SEC7 domain-containing protein 3.	RNA-binding protein 43.	0.539
KPNB1	RBM43	ENSLSDP00000002331	ENSLSDP00000003486	Importin subunit beta-1.	RNA-binding protein 43.	0.476
RBM43	B2M	ENSLSDP00000003486	ENSLSDP00000015644	RNA-binding protein 43.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.444
RBM43	IQSEC3	ENSLSDP00000003486	ENSLSDP00000025424	RNA-binding protein 43.	IQ motif and SEC7 domain-containing protein 3.	0.539
RBM43	KPNB1	ENSLSDP00000003486	ENSLSDP00000002331	RNA-binding protein 43.	Importin subunit beta-1.	0.476
RBM43	RNF144B	ENSLSDP00000003486	ENSLSDP00000015265	RNA-binding protein 43.	RBR-type E3 ubiquitin transferase.	0.547
RBM43	RPA2	ENSLSDP00000003486	ENSLSDP00000020660	RNA-binding protein 43.	Replication protein A subunit.	0.444
RBM43	SASS6	ENSLSDP00000003486	ENSLSDP00000014908	RNA-binding protein 43.	Spindle assembly abnormal protein 6.	0.444
RBM43	STN1	ENSLSDP00000003486	ENSLSDP00000006763	RNA-binding protein 43.	CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.	0.444
RNF144B	RBM43	ENSLSDP00000015265	ENSLSDP00000003486	RBR-type E3 ubiquitin transferase.	RNA-binding protein 43.	0.547
RPA2	RBM43	ENSLSDP00000020660	ENSLSDP00000003486	Replication protein A subunit.	RNA-binding protein 43.	0.444
SASS6	RBM43	ENSLSDP00000014908	ENSLSDP00000003486	Spindle assembly abnormal protein 6.	RNA-binding protein 43.	0.444
STN1	RBM43	ENSLSDP00000006763	ENSLSDP00000003486	CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.	RNA-binding protein 43.	0.444