STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCSK1Neuroendocrine convertase 1; Belongs to the peptidase S8 family. (749 aa)    
Predicted Functional Partners:
ENSLSDP00000025165
annotation not available
     
 0.799
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
 0.715
ENSLSDP00000025585
annotation not available
      
 0.659
USP24
Ubiquitin carboxyl-terminal hydrolase 24; Belongs to the peptidase C19 family.
      
 0.658
GCG
Glucagon.
     
 0.602
FAP
Dipeptidyl peptidase 4; Belongs to the peptidase S9B family.
     
 0.602
CARTPT
Cocaine- and amphetamine-regulated transcript protein.
   
  
 0.550
RXFP1
Relaxin receptor 1.
   
 0.545
LGR4
Leucine-rich repeat-containing G-protein coupled receptor 4.
   
 0.545
LGR5
Leucine-rich repeat-containing G protein-coupled receptor 5.
   
 0.545
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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