STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000003490annotation not available (128 aa)    
Predicted Functional Partners:
APP
Amyloid beta A4 protein.
    
 0.647
CTRL
Chymotrypsin-like protease CTRL-1.
  
0.595
CTRC
Chymotrypsin-C; Belongs to the peptidase S1 family.
  
 
  0.586
CAC3
Proproteinase E; Belongs to the peptidase S1 family.
  
 
  0.586
LOC110481815
Chymotrypsin-like elastase family member 1; Belongs to the peptidase S1 family.
  
 
  0.584
MET
Hepatocyte growth factor receptor.
    
 0.581
MST1R
Macrophage-stimulating protein receptor.
    
 0.581
ENSLSDP00000026161
annotation not available
  
 
  0.579
TFPI
Tissue factor pathway inhibitor.
    
 0.571
AMBP
Protein AMBP.
   
 0.566
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.