STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBHDopamine beta-hydroxylase. (612 aa)    
Predicted Functional Partners:
DDC
Aromatic-L-amino-acid decarboxylase.
     
 0.954
COMT
Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.
     
 0.948
LOC110474872
Amine oxidase.
     
 0.931
LOC110474874
Amine oxidase.
     
 0.931
LOC110471837
Amine oxidase.
     
  0.900
PNMT
Phenylethanolamine N-methyltransferase.
   
 
 0.645
TH
Tyrosine 3-monooxygenase.
   
  
 0.626
PAH
Phenylalanine-4-hydroxylase.
      
 0.603
SPR
Uncharacterized protein.
      
 0.589
GAL
Galanin peptide.
      
 0.557
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.