STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCF1rRNA-processing protein FCF1. (198 aa)    
Predicted Functional Partners:
UTP14A
U3 small nucleolar RNA-associated protein 14 A.
   
 0.998
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.997
EMG1
Ribosomal RNA small subunit methyltransferase NEP1.
   
 0.996
UTP3
Something about silencing protein 10 isoform X1.
   
 0.996
BMS1
Ribosome biogenesis protein BMS1.
   
 0.995
NOP58
Nucleolar protein 58.
   
 0.995
UTP20
Small subunit processome component 20.
   
 0.993
PDCD11
Protein RRP5.
   
 0.992
NOP14
Nucleolar protein 14.
   
 0.992
NOL6
Nucleolar protein 6.
   
 0.992
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.