STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA10Integrin alpha-10; Belongs to the integrin alpha chain family. (951 aa)    
Predicted Functional Partners:
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.745
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.734
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.723
ITGB2
Integrin beta.
   
 0.710
ITGB4
Integrin beta.
   
 0.631
ITGA9
Integrin alpha-9; Belongs to the integrin alpha chain family.
   
 
0.586
ITGA3
Integrin alpha-3; Belongs to the integrin alpha chain family.
   
 
0.586
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.577
VCL
Vinculin.
   
 
 0.568
ITGAV
Integrin alpha-V; Belongs to the integrin alpha chain family.
   
 
0.563
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.