STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL4Sal-like protein 4. (1017 aa)    
Predicted Functional Partners:
LOC110472349
Homeobox protein NANOG.
   
 0.928
LOC110472216
POU domain protein.
   
 0.914
RBBP4
Histone-binding protein RBBP4.
   
 0.731
RBBP7
Histone-binding protein RBBP7.
   
 0.728
CRBN
Protein cereblon.
    
 
 0.687
ARID4B
AT-rich interactive domain-containing protein 4B.
      
 0.662
ADAMTS18
A disintegrin and metalloproteinase with thrombospondin motifs 18.
   
  
 0.651
IRX3
Iroquois-class homeodomain protein irx-3.
      
 0.639
USH1C
Harmonin.
      
 0.625
GATAD2B
Transcriptional repressor p66-beta.
    
 0.616
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.