Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110472379Breast carcinoma-amplified sequence 1. (183 aa)    
Predicted Functional Partners:
PLP1
Myelin proteolipid protein.
   
  
 0.647
ENPP6
Ectonucleotide pyrophosphatase/phosphodiesterase family member 6.
   
 
 0.646
PDGFRA
Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development.
    
 
 0.639
QKI
Protein quaking.
   
 
 0.603
ZNF217
Zinc finger protein 217.
    
 0.587
MBP
Myelin basic protein.
   
  
 0.554
VAT1
Synaptic vesicle membrane protein VAT-1.
      
 0.521
FANCM
Fanconi anemia group M protein.
    
 0.498
LOC110477051
Fanconi anemia group M protein.
    
 0.498
TSPAN2
Tetraspanin.
   
 
 0.477
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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