STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH5Retinol dehydrogenase 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (357 aa)    
Predicted Functional Partners:
RDH10
Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
0.921
LOC110473996
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
0.914
ALDH1A3
Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family.
   
 
 0.913
RPE65
Retinoid isomerohydrolase.
   
 
 0.912
LRAT
Lecithin retinol acyltransferase.
     
 0.911
ALDH1A2
Retinal dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
   
 
 0.905
ALDH1A1
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
   
 
 0.905
AOX1
Aldehyde oxidase.
     
 0.900
LOC110475385
Corticosteroid 11-beta-dehydrogenase isozyme 1.
  
 
 0.468
RLBP1
Retinaldehyde-binding protein 1.
    
 0.462
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.