Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MLH3DNA mismatch repair protein Mlh3. (1402 aa)    
Predicted Functional Partners:
MLH1
DNA mismatch repair protein Mlh1.
    
0.991
MSH5
DNA mismatch repair protein MSH5.
  
 0.967
ENSLSDP00000020172
annotation not available
  
 0.966
MSH6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.935
MSH2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.932
MSH3
DNA mismatch repair protein Msh3.
  
 0.854
BLM
Bloom syndrome.
  
 0.770
PMS1
PMS1 1.
   
0.764
PMS2-2
Mismatch repair endonuclease PMS2.
   
0.755
RECQL4_0
ATP-dependent DNA helicase Q4.
  
 0.752
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.