Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
STXBP3Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (594 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.867
VAMP4
Vesicle-associated membrane protein 4.
    
 0.859
RIMS2
Regulating synaptic membrane exocytosis protein 2.
     
 0.845
PLPPR1
Lipid phosphate phosphatase-related protein type 1.
    
   0.836
EXOC5
Exocyst complex component 5.
    
 0.833
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 0.817
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.811
VAMP3
Vesicle-associated membrane protein 3.
    
 0.803
EXOC4
Exocyst complex component 4.
    
 0.795
EXOC1
Exocyst complex component 1.
   
 0.781
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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