STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCC1Chloride channel CLIC-like protein 1. (518 aa)    
Predicted Functional Partners:
LOC110473688
Cytochrome c oxidase assembly protein COX15.
  
 
 0.856
COX11
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 
 0.854
LOC110475983
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.854
COX10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 
 0.804
MT-CO1
Mitochondrially encoded cytochrome c oxidase I.
  
 
 0.707
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
    
 
 0.684
MT-CO2
Mitochondrially encoded cytochrome c oxidase II.
  
 
 0.626
MT-CO3
Mitochondrially encoded cytochrome c oxidase III.
  
  
 0.586
CYC1
Cytochrome c1, heme protein, mitochondrial.
   
 0.577
LOC110474919
Protein SCO1, mitochondrial.
  
  
 0.574
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.