STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR47WD repeat-containing protein 47. (928 aa)    
Predicted Functional Partners:
CAMSAP2
Calmodulin-regulated spectrin-associated protein 2.
 
 
 
 0.739
FBXO33
F-box only protein 33.
      
 0.576
WDR78
WD repeat domain 78.
      
 0.560
CAMSAP1
Calmodulin-regulated spectrin-associated protein 1.
 
 
 
 0.554
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
      
 0.531
WDR63
WD repeat-containing protein 63.
      
 0.526
NME6
NME/NM23 nucleoside diphosphate kinase 6.
      
 0.408
WDR37
WD repeat-containing protein 37.
      
 0.404
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.