STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35D3Solute carrier family 35 member D3. (421 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 
 0.676
TMEM230
Transmembrane protein 230.
      
 0.590
LARP6
La-related protein 6.
      
 0.549
LYPLAL1
Lysophospholipase-like protein 1.
      
 0.541
SLC35B4
UDP-xylose and UDP-N-acetylglucosamine transporter.
   
  
 0.527
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
      
 0.515
SLC35B3
Adenosine 3'-phospho 5'-phosphosulfate transporter 2.
   
  
 0.512
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.505
SLC35F1
Solute carrier family 35 member F1.
   
  
 0.492
RLOC_00013371
Uncharacterized protein.
      
 0.476
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.