STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFT43Intraflagellar transport protein 43. (209 aa)    
Predicted Functional Partners:
TTC21B
Tetratricopeptide repeat protein 21B.
    
 0.989
IFT140
Intraflagellar transport protein 140.
    
 0.988
IFT122
Intraflagellar transport protein 122.
    
 0.987
WDR35
WD repeat-containing protein 35.
    
 0.984
WDR19
WD repeat-containing protein 19.
    
 0.981
IFT46
Intraflagellar transport protein 46.
   
 
 0.815
IFT52
Intraflagellar transport protein 52.
     
 0.796
IFT80
Intraflagellar transport protein 80.
    
 0.791
IFT74
Intraflagellar transport protein 74.
     
 0.778
IFT88
Intraflagellar transport protein 88.
     
 0.777
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.