Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IRF2BPLInterferon regulatory factor 2-binding protein-like. (737 aa)    
Predicted Functional Partners:
IRF2
Interferon regulatory factor 2.
    
 
 0.831
VGLL4
Transcription cofactor vestigial-like protein 4.
    
 
 0.731
GTPBP1
GTP-binding protein 1.
      
 0.541
JUP
Junction plakoglobin.
    
 
 0.519
FOSL2
Fos-related antigen 2.
    
   0.506
CTNNB1
Catenin beta-1.
    
 
 0.470
SRF
Serum response factor.
      
 0.469
TARBP1
Putative methyltransferase TARBP1.
      
 0.429
ARL16
ADP-ribosylation factor-like protein 16.
    
 
 0.422
LAMP1
Lysosome-associated membrane glycoprotein 1.
      
 0.420
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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