Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NLGN1Neuroligin-1. (863 aa)    
Predicted Functional Partners:
NRXN1
Neurexin-1.
   
 0.974
NRXN3
Neurexin-3.
   
 0.962
ENSLSDP00000004177
annotation not available
   
 0.645
ENSLSDP00000004589
annotation not available
   
 0.645
DLGAP1
Disks large-associated protein 1.
   
 
 0.593
NRXN3-2
Neurexin 3.
   
 0.580
WDR43
WD repeat-containing protein 43.
   
 0.563
UTP4
Cirhin.
   
 0.526
WDR75
WD repeat-containing protein 75.
   
  0.498
DLG2
Disks large 2.
    
 0.477
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.