STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC16Thioredoxin domain-containing protein 16. (796 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
    
 0.951
CALR
Calreticulin.
   
 0.611
MSRA
Mitochondrial peptide methionine sulfoxide reductase.
   
 0.597
DDHD1
Phospholipase DDHD1.
      
 0.573
HSPA5
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.572
FOXRED2
FAD-dependent oxidoreductase domain-containing protein 2.
    
 
 0.564
ERO1A
ERO1-like protein alpha.
   
 0.553
NIPAL2
NIPA-like protein 2.
      
 0.550
STYX
Serine/threonine/tyrosine-interacting protein.
     
 0.545
PSMC6
26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.
    
 
 0.531
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.