STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC45Leucine-rich repeat-containing protein 45. (661 aa)    
Predicted Functional Partners:
CNTLN_1
Centlein.
      
 0.628
WDR37
WD repeat-containing protein 37.
      
 0.589
ARMC8
Armadillo repeat-containing protein 8.
      
 0.574
SCLT1
Sodium channel and clathrin linker 1.
    
 
 0.567
ANKS3
Ankyrin repeat and SAM domain-containing protein 3.
   
    0.566
CEP135
Centrosomal protein.
      
 0.555
PHACTR1
Phosphatase and actin regulator.
      
 0.541
KXD1
KxDL motif-containing protein 1.
    
  0.497
KIF2A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.474
C2CD3
C2 domain-containing protein 3.
     
 0.462
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.