Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CENPXCentromere protein X isoform X1. (143 aa)    
Predicted Functional Partners:
CENPS
Centromere protein S.
    
 0.998
FANCL
E3 ubiquitin-protein ligase FANCL.
    
 0.993
FANCF
FA complementation group F.
    
 0.993
FANCC
Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1.
    
 0.992
FANCM
Fanconi anemia group M protein.
    
 0.992
FANCG
Fanconi anemia group G protein.
    
 0.992
FANCA
Fanconi anemia group A protein.
    
 0.991
FAAP100
Fanconi anemia-associated protein.
    
 0.964
FANCD2
Fanconi anemia group D2 protein.
     
 0.960
FANCI
Fanconi anemia group I protein.
     
 0.951
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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