RTRAF protein (Lonchura striata) - STRING interaction network

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[Homology]

Score

RTRAF

UPF0568 protein C14orf166. (244 aa)

Predicted Functional Partners:

RTCB

0.984

C2orf49

0.982

FAM98B

0.982

DDX1

0.979

FAM98A

0.951

THOC7

0.698

MED29

0.692

TMEM144

0.676

ZBTB8OS

0.671

PLCXD1

0.645

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2orf49	DDX1	ENSLSDP00000021869	ENSLSDP00000000373	Ashwin.	ATP-dependent RNA helicase DDX1.	0.972
C2orf49	FAM98A	ENSLSDP00000021869	ENSLSDP00000005859	Ashwin.	Protein FAM98A.	0.848
C2orf49	FAM98B	ENSLSDP00000021869	ENSLSDP00000025754	Ashwin.	Protein FAM98B.	0.991
C2orf49	RTCB	ENSLSDP00000021869	ENSLSDP00000000583	Ashwin.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.989
C2orf49	RTRAF	ENSLSDP00000021869	ENSLSDP00000003749	Ashwin.	UPF0568 protein C14orf166.	0.982
C2orf49	ZBTB8OS	ENSLSDP00000021869	ENSLSDP00000006163	Ashwin.	Protein archease.	0.839
DDX1	C2orf49	ENSLSDP00000000373	ENSLSDP00000021869	ATP-dependent RNA helicase DDX1.	Ashwin.	0.972
DDX1	FAM98A	ENSLSDP00000000373	ENSLSDP00000005859	ATP-dependent RNA helicase DDX1.	Protein FAM98A.	0.978
DDX1	FAM98B	ENSLSDP00000000373	ENSLSDP00000025754	ATP-dependent RNA helicase DDX1.	Protein FAM98B.	0.987
DDX1	RTCB	ENSLSDP00000000373	ENSLSDP00000000583	ATP-dependent RNA helicase DDX1.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.991
DDX1	RTRAF	ENSLSDP00000000373	ENSLSDP00000003749	ATP-dependent RNA helicase DDX1.	UPF0568 protein C14orf166.	0.979
DDX1	ZBTB8OS	ENSLSDP00000000373	ENSLSDP00000006163	ATP-dependent RNA helicase DDX1.	Protein archease.	0.784
FAM98A	C2orf49	ENSLSDP00000005859	ENSLSDP00000021869	Protein FAM98A.	Ashwin.	0.848
FAM98A	DDX1	ENSLSDP00000005859	ENSLSDP00000000373	Protein FAM98A.	ATP-dependent RNA helicase DDX1.	0.978
FAM98A	FAM98B	ENSLSDP00000005859	ENSLSDP00000025754	Protein FAM98A.	Protein FAM98B.	0.964
FAM98A	RTCB	ENSLSDP00000005859	ENSLSDP00000000583	Protein FAM98A.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.985
FAM98A	RTRAF	ENSLSDP00000005859	ENSLSDP00000003749	Protein FAM98A.	UPF0568 protein C14orf166.	0.951
FAM98A	ZBTB8OS	ENSLSDP00000005859	ENSLSDP00000006163	Protein FAM98A.	Protein archease.	0.540
FAM98B	C2orf49	ENSLSDP00000025754	ENSLSDP00000021869	Protein FAM98B.	Ashwin.	0.991
FAM98B	DDX1	ENSLSDP00000025754	ENSLSDP00000000373	Protein FAM98B.	ATP-dependent RNA helicase DDX1.	0.987