Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FNDC3BFibronectin type III domain-containing protein 3B. (1159 aa)    
Predicted Functional Partners:
MLN
Promotilin.
      
 0.873
TRIP13
Pachytene checkpoint protein 2; Belongs to the AAA ATPase family.
    
   0.627
API5
Apoptosis inhibitor 5.
      
 0.608
BAHD1
Bromo adjacent y domain-containing 1 protein.
      
 0.584
PIAS4
E3 SUMO-protein ligase PIAS4.
    
 
 0.571
ERC2
ERC protein 2.
    
 
 0.569
PLEKHM3
Pleckstrin y domain-containing family M member 3.
      
 0.565
LRRC34
Leucine-rich repeat-containing protein 34.
    
 
 0.511
TMTC2
Transmembrane and TPR repeat-containing protein 2.
   
 
 0.471
ANKRD55
Ankyrin repeat domain-containing protein 55.
    
 0.463
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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