STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110483676C5a anaphylatoxin chemotactic receptor 1; Belongs to the G-protein coupled receptor 1 family. (371 aa)    
Predicted Functional Partners:
C5
Complement C5.
    
 0.979
LOC110468582
Complement C4.
    
 0.619
C3
Complement C3.
    
 0.619
ENSLSDP00000025165
annotation not available
    
 0.491
C1QA
Complement C1q subcomponent subunit A.
   
 0.490
PNOC
Prepronociceptin.
    
  0.459
GAL
Galanin peptide.
    
 0.456
PENK
Proenkephalin-A.
    
 0.455
SST
Somatostatin.
    
  0.443
NMU
Neuromedin-U.
    
 0.433
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.