STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R27Protein phosphatase 1 regulatory subunit 27. (152 aa)    
Predicted Functional Partners:
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.661
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.661
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.661
DHX8
ATP-dependent RNA helicase DHX8.
   
 0.592
NDUFA3
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 3.
      
 0.508
ANKRD2
Ankyrin repeat domain-containing protein 2.
  
    0.476
SHISA4
Protein shisa-4.
    
 
 0.455
ASB5
Ankyrin repeat and SOCS box protein 5.
  
    0.448
LOC110471621
Ankyrin repeat and SOCS box protein 9.
  
    0.424
ASB11
Ankyrin repeat and SOCS box protein 11.
  
    0.420
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.