Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PPP1R27Protein phosphatase 1 regulatory subunit 27. (152 aa)    
Predicted Functional Partners:
ENDOV
Endonuclease V.
      
 0.565
NDUFA3
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 3.
      
 0.565
SIRT7
NAD+-dependent protein deacetylase sirtuin 7.
    
 0.546
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.544
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.544
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.544
DHX8
ATP-dependent RNA helicase DHX8.
   
 0.543
SHISA4
Protein shisa-4.
      
 0.536
PSKH1
Serine/threonine-protein kinase H1; Belongs to the protein kinase superfamily.
    
 
 0.505
P4HB
Protein disulfide-isomerase.
    
 0.483
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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