Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CITED2Cbp/p300-interacting transactivator 2. (240 aa)    
Predicted Functional Partners:
EP300
Histone acetyltransferase p300.
    
 0.979
CREBBP
CREB-binding protein.
    
 0.957
FOXO3
Forkhead box protein O3.
    
 0.928
TFAP2C
Transcription factor AP-2 gamma.
    
 0.884
CREG1
Protein CREG1; Belongs to the CREG family.
      
 0.841
SNAI2
Zinc finger protein SNAI2.
   
  
 0.691
NRG4
Pro-neuregulin-4, membrane-bound isoform.
      
 0.669
SLIT2
Slit 2 protein.
      
 0.654
TFAP2D
Transcription factor AP-2-delta.
    
 0.648
TFAP2A
Transcription factor AP-2-alpha.
    
 0.622
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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