STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP2ACharged multivesicular body protein 2a. (321 aa)    
Predicted Functional Partners:
LOC110473306
Charged multivesicular body protein 3.
   
0.995
CHMP6
Charged multivesicular body protein 6.
   
 0.979
CHMP5
Charged multivesicular body protein 5.
   
 0.977
VPS4A
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
    
 0.968
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
    
 0.968
CHMP4C
Charged multivesicular body protein 4c.
   
 0.965
CHMP4B
Charged multivesicular body protein 4b.
   
 0.965
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.951
IST1
IST1.
    
 0.941
CHMP1A
Charged multivesicular body protein 1a.
   
0.935
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.