Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR160Putative G-protein coupled receptor 160. (339 aa)    
Predicted Functional Partners:
SLC39A6
Zinc transporter ZIP6.
      
 0.693
LOC110477495
Putative G-protein coupled receptor 88.
      
 0.613
SAMD7
Sterile alpha motif domain containing 7.
      
 0.599
GPR142
Putative G-protein coupled receptor 142.
      
 0.586
KLHL8
Kelch-like protein 8.
      
 0.578
LRRC34
Leucine-rich repeat-containing protein 34.
      
 0.571
SEC62
Translocation protein SEC62.
      
 0.568
GPR162
Probable G-protein coupled receptor 162.
      
 0.558
PHC3
Polyhomeotic-like protein 3.
      
 0.548
OTOS
Otospiralin.
      
 0.546
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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