STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD7Sterile alpha motif domain containing 7. (457 aa)    
Predicted Functional Partners:
OPN1SW
Ultraviolet-sensitive opsin.
     
 0.664
GPR160
Putative G-protein coupled receptor 160.
      
 0.553
LOC110481609
Blue-sensitive opsin; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
     
 0.525
LRIT1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 
 0.500
LOC110483808
Extracellular serine/threonine protein kinase FAM20C.
   
  0.448
WFS1
Wolframin.
     
 0.420
SPARC
Secreted protein acidic and rich in cysteine.
     
 0.418
SPARCL1
SPARC-like protein 1.
     
 0.418
ADAM17
Disintegrin and metalloproteinase domain-containing protein 17.
   
 
  0.413
ADAM10
Disintegrin and metalloproteinase domain-containing protein 10.
   
 
  0.413
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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