Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAMD7Sterile alpha motif domain containing 7. (457 aa)    
Predicted Functional Partners:
OPN1SW
Ultraviolet-sensitive opsin.
      
 0.874
LOC110481609
Blue-sensitive opsin; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
      
 0.657
GPR160
Putative G-protein coupled receptor 160.
      
 0.599
LRIT1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.568
OTOS
Otospiralin.
   
  
 0.562
SEC62
Translocation protein SEC62.
      
 0.545
SMAD7
Mothers against decapentaplegic homolog.
      
 0.501
SAMD5
Sterile alpha motif domain-containing protein 5.
      
 0.491
NR2E3
Photoreceptor-specific nuclear receptor.
   
  
 0.484
LOC110482576
Sodium/potassium-transporting ATPase subunit alpha-3.
      
 0.482
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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